Determining if multiple isolates share the same antimicrobial resistant plasmids using short read whole genome sequencing data
Description
Determining if multiple isolates share the same antimicrobial resistant plasmids using short read whole genome sequencing data.
Detailed example
A probability estimating whether multiple isolates share the same antimicrobial resistant plasmid.
AI / analytics pattern
Classical/Predictive Machine Learning: Models trained on data to make predictions or classifications based on identified patterns or relationships.
Automation level / stage
b) Pilot – The use case has been deployed in a limited test or pilot capacity.
Expected benefit
This will help in the early identification of outbreaks of antimicrobial resistant healthcare associated infections caused by the horizontal transmission of plasmids, which will help to increase the speed at which outbreaks are detected and addressed, potentially decreasing cases saving lives.
Controls / human review
ATO: No; PIA: Not published